Showing posts with label open standards. Show all posts
Showing posts with label open standards. Show all posts

2011-09-22

I Met Michael Nielsen!

I did it today! Woot! (And I got a picture with him!) Although he is specifically a physicist, most well known for his seminal textbook on quantum computing, he came to give a colloquium about open science in general, and it's doubly cool for me because I'm interested in both physics and things like open science. (Also, before the talk, I mentioned to him that I first read about him on Glyn Moody's blog, which you should totally read. That's how Dr. Nielsen figured out I'm a free software kind of guy. He also told me that Mr. Moody's a cool guy too.)

He talked about stuff like the development of Linux and Wikipedia through crowdsourcing, but he also discussed failures like the innumerable abandoned technical wikis intended to attract the best researchers in that field that litter the web. He also discussed how scientists' conservatism regarding releasing data openly dates back many centuries, when 200 years after the introduction of the printing press in Europe, scientists in Europe were still reluctant to release their work in print. He took that to today and how that conservatism negatively affects research progress, along with what some people have done to combat it, and in the spirit of the talk, he opened the floor to questions and also to discussion about how individual scientists can promote and do open science.

I was able to ask him a question about one thing he said about Galileo: apparently, Galileo was concerned about other people getting credit for doing the same work as him independently of him, so he only "published" his work by sending a few select other scientists his work, but scrambled into anagrams unreadable at first sight. Then, if those scientists tried to publish similar work independently, he would be able to pull out the unscrambled manuscripts and prove that he came up with those ideas first. I asked him if the scrambling was really done for that purpose, given that Galileo published his work about a heliocentric universe in vernacular Italian, as opposed to the scholarly Latin, specifically to reach the masses (and that's what got him the undue attention of the Roman Catholic Church). Dr. Nielsen replied that while that might be the case, it is clear that his intent with those scrambled letters was to ensure that credit would go to himself first, as Johannes Kepler actually begged Galileo to tell him the unscrambled message, and Galileo refused until Kepler's patron (the Holy Roman Emperor) got into the act too. It was interesting for me to hear about these two sides of Galileo. I was going to also ask him how gene patenting squared with the Bermuda Accords, which were codified into policy by many countries to force scientists to release sequenced genomes into the public domain if said sequences were more than 1000 base pairs long. Unfortunately, there wasn't enough time to ask him that.

(UPDATE: I was also lucky enough to be picked (among about 7-8 other people) to chat with him over lunch today! Yay! Our conversation started with the question of how to get people to truly trust what scientists are telling them, because unless everyone is an expert in every field that gets featured on the news, at some point some level of trust and faith in the verity of what scientists say is unfortunately required. Plus, it's no good if scientists become like fundamentalist preachers standing at the front of the room as a so-called authority dictating how people should think. I think the consensus regarding outreach in this sense is really to start with getting young kids into science, and to plant seeds of curiosity and critical thinking in people in different cities and towns, because people will probably be more open and receptive to scientific ideas if they come from the mouths of their neighbors as opposed to the mouths of outsiders.

The conversation then shifted to other random stuff, including sports, movies, and the recent discovery of neutrinos that travel faster than light through the Earth's innards (but still slower than light in a vacuum). I was able to also ask the question about gene patenting versus the Bermuda Accords, and Dr. Nielsen admitted that his understanding of gene patents was only marginally better than that of a layperson and that he didn't really know what to say about it, aside from the fact that the Accords only seem to apply to sequences of already-existing DNA. Additionally, I asked him how people getting into academia who do not yet have tenure (and the associated very high job security) could practice more open science. He conceded that he really is advocating for more thorough, comprehensive reform on the part of scientists and journals; he reminded me of how yesterday he discussed how only the most cutting-edge (in terms of making the most use of new technologies) journals accept things like YouTube videos, despite the fact that many times, it is almost trivially easy to show in a video what is otherwise almost impossible to clearly write in a paper. He said that individual scientists should publish in open-access journals if said journals exist in the field and if they are of the same quality and have the same quality standards as closed-access counterparts; in addition, if scientists truly believe that things like computer code that they write will be very widely used, they should open that code into the public domain, but asking scientists to open-source everything would be too much and, perhaps, sometimes unwise in and of itself.

The conversations I was able to have with him before and during his colloquium talk and during this lunch were incredibly satisfying and intellectually stimulating, and it makes me so glad that I'm here right now!)

2011-01-19

Review: Trisquel 4.0.1 LTS "Taranis"

Main Screen + Main Menu
I've read a couple of reviews of Trisquel GNU/Linux, an Ubuntu-based distribution which aims to remove as much non-free (i.e. proprietary) software from the kernel and distribution as possible. There are a couple other distributions that do this, like Slackware-based Kongoni, KNOPPIX-based Musix, and Fedora-based BLAG. However, as stated by Jim Lynch in his review of Trisquel 4.0 LTS "Taranis", quite a few of these other pure-free software distributions, such as Musix, BLAG, and DYNE:BOLIC, share a few common features which all conspire to turn off potential new users: incomplete/amateurish websites, too much talk about "overthrows" of proprietary software or free software "revolutions" (to the detriment of promoting the features of the OS itself), and less-than-user-friendly DEs/WMs (e.g. WindowMaker). It seems like using these distributions would be like wearing a cilice (also called a hair-shirt, a shirt medieval Christian monks used to wear with rough animal hair on the inside; the monks used to wear these to repent by causing themselves physical pain) — good for the soul and conscience, but not very comfortable and not something I would want to do. By contrast, Trisquel (whose code name for this release is, ironically, "Taranis", the Gallic thunder deity) has a very professional-looking website, uses a well-tailored implementation of GNOME, and touts the benefits of free software and of using Trisquel without getting preachy or heavy-handed. Taking the previous analogy further, it seems like using Trisquel would be more like wearing a comfortable jacket. Seeing the website and presentation of the distribution didn't turn me off, so I decided to proceed downloading the ISO file of the standard edition.
As this is an Ubuntu derivative, there's really no point in testing the installation procedure. What I'm looking for is compatibility with my hardware as well as the overall quality of the live session. Hence, after the download finished, I made a live USB system with UnetBootin, rebooted, changed the boot order in the BIOS, and went on my way. Follow the jump to see the results of that.

2010-06-09

Pearson Owns the System!

I found out today that my school system has essentially sold itself out to Pearson Education in a multimillion dollar contract, which is peanuts compared to the size of the budget, etc.
While I can't help but be suspicious about this move, after reading the proposal submitted (or, at least, the first 5 pages of it) by Pearson, I am a little calmed by the fact that Pearson describes itself as committed to "open industry standards for interoperability".
Of course, Microsoft says the same quite often, and yet we all know how that turns out in the end. (That is what the cynical side of me is telling me.)
Let's see how this turns out, though I am a bit wary.
Oh Tim, whatever happened to the school system?