Showing posts with label chemistry. Show all posts
Showing posts with label chemistry. Show all posts

2020-02-03

Book Review: "Michael Polanyi" by Mark T. Mitchell

I've recently read the book Michael Polanyi by Mark T. Mitchell. (As an aside, it may be worth noting that some listings of this book carry the subtitle The Art of Knowing, but the usage of this subtitle within the copy of the book I got was inconsistent.) The book gives a relatively brief summary of the life and times of the physical chemist-turned-economist/philosopher Michael Polanyi in the first chapter, and then goes into a little more detail about his philosophies on economics, politics, science, morality, knowledge, religion, and other things in the second through fourth chapters, concluding in the fifth chapter with a comparison of his philosophical views to those of his contemporaries along with a little discussion about the implications of Polanyi's views for the present day.

The book is fairly short, well-written, and engaging even for a layperson like myself. The overview of Polanyi's life is quite interesting, and as I am considering the next steps for my own career (more on that in a future post), I was particularly taken by the story of Polanyi's career change so late in life. The discussion of his philosophy avoids unexplained jargon and very heavy technical arguments, instead clearly laying things out in simple terms & examples, and I was surprised (mainly as I was previously unacquainted with Polanyi's work per se, even though I have already read works about some of the people who influenced him and whom he may have influenced) to see myself having come to similar conclusions as Polanyi even before reading this book. With respect to the latter point, though, I do have a few criticisms, which are attributable in parts to Polanyi or to the author of this book. For one, the appeals to common sense & simple examples lead to the situation where the defense of Polanyi's theory of tacit knowledge against charges of subjectivism or circularity (i.e. begging the question) isn't necessarily as tightly constructed or satisfying as possible; some of this comes from Polanyi's own quotes, while the remainder comes from the author (who seems to agree with and follow Polanyi's philosophy). For another, some of Polanyi's defenses of Christianity and critiques of evolutionary theory, with respect to their implications for constructing meaning out of human existence, aren't clear as to how broadly they should be applied in his more general framework, and it isn't clear whether this very opacity is in itself the fault of Polanyi versus the author of this book. Overall, I really enjoyed reading this book, and would recommend it to anyone looking for a nontechnical clear read about a sometimes-overlooked figure in Western philosophy of the 20th century. Follow the jump to read more detailed summaries per chapter and about my thoughts regarding the book as well as Polanyi's philosophy (warning: it may be quite roughly organized).

2019-03-21

My Time at the 2019 APS March Meeting

This is a quick update from my trip to the 2019 APS March Meeting in Boston, Massachusetts at the beginning of March. I felt like my time overall was somewhat mixed, though positive on balance. On the negative side, my talk was lumped into a totally unrelated session on a Thursday afternoon, in which the talks weren't of interest to me and were generally not so well-delivered, the audience consisted almost entirely of the speakers who left after their own talks (and that included me after I saw what was happening, though I was grateful that some of my friends came for my talk), and the first talk which was supposed to be a 36 minute-long invited talk was canceled in the absence of the speaker, leading to a break during that time. Additionally, my advisor and I were busy preparing a paper unrelated to the work I would be presenting, and I've also been taking my time to figure out what I want to do after graduation, so I didn't prepare a schedule of talks to attend as well as I had in the previous two years. That said, on the positive side, I paced myself properly in attending talks, and I did appreciate having conversations with people from my department as well as people I knew in college about our work as well as future plans. I also had a lot of fun hanging out with friends from college as well as graduate school, and though I could have done a better job networking, I did try to reach out as much as I could. Finally, I had a great time skipping the last day of the conference and visiting MIT instead, where I got to catch up with professors from the physics department as well as other people whom I knew well in college (and met some people for the first time too); I felt like that was a far more useful & productive move. Next year, I hope to be able to present in a session more relevant to my current research interests, and to do a better job of tailoring my networking and session attendance to my future interests (which I hope will have solidified by then).

2018-03-19

My Time at the 2018 APS March Meeting

This is a quick update from my trip to the 2018 APS March Meeting in Los Angeles, California at the beginning of March. I felt like I learned many lessons from my trip to the 2017 APS March Meeting and was able to apply them here. Chief among them, I realized that a large part of this conference is networking, whether that involves the formation of new relationships or the maintenance of old ones, so I got to enjoy myself more in meeting with old friends and collaborators and making some new connections as well; that also meant that I focused more on going to talks of immediate relevance to my research interests as well as my friends' talks to show them support, and I didn't worry about trying to fill each day by attending talks and sessions like I did last year. I was able to present my work this time too: I presented a model for vibrational contributions to radiative heat transfer and van der Waals interactions among molecules, along with interesting results in specific systems. This was in a session that included people from both the microscopic van der Waals and macroscopic Casimir communities, and while I was the only one who discussed heat transfer per se, I did get to see a nice mixture of the two communities, and some interesting discussions did come out of that. Overall, I had a great time, but I do think that as I progress further in my graduate research career, it may be good to not only continue to attend the APS March Meeting in the future but look into more specialized conferences too.

2018-02-26

Halfway through Fourth Year

I realized that I hadn't written anything broadly about my progress through the PhD program in a while, so I should do that now. I'm halfway through the fourth year of the program, and this year has allowed me to take on more responsibilities compared to last academic year.

For one, I'm now doing more projects than I was last year. In particular, last year, my main focus was on fleshing out a way to combine atomistic and continuum treatments of electrodynamic response in order to understand van der Waals interactions among molecules and larger bodies (which was the subject of my second paper). I did a bit of work on the side extending this to situations where the molecules may deform, and while that work still hasn't been published yet, it was not particularly difficult to understand what was going on there given the broader picture of mesoscopic van der Waals interactions. In any case, I was able to basically focus on one major project whose path and end goal seemed fairly well-defined, and as a result, I was able to take things a bit easier. By contrast, right now I'm working on two parallel projects incorporating vibrational effects into this description of molecular response and seeing how that affects the van der Waals interactions as well as heat transfer between molecules. This required quite a bit more formulation and writing & testing code on my part, and featured significantly more uncertainty in the results, because while the basic formulation of van der Waals interactions between molecules and macroscopic bodies for my previous project could be relatively easily extrapolated from our collaborators' description of interactions among molecules alone (and the resulting physical interactions were relatively more predictable), I wasn't really sure what to expect with respect to the modification of these interactions due to vibrations, nor what to expect for heat transfer or thermal emission at all; this is because as far as I can tell, other people haven't really considered molecular vibrations in such a context in an ab-initio manner thus far. Thus, I've felt like in terms of research, I have a lot more work and more uncertainty on my plate now than I did a year ago.

For another, I was a TA for the first time last semester and am a TA again this semester. This semester is turning out to be particularly interesting in that regard, because while last semester I was a TA for a graduate-level quantum mechanics class where I could basically count on students knowing what they were doing and not needing me to hold their hands at every obstacle, this semester I am a TA for a freshman-level linear algebra class that is being taught as an engineering class for the first time; not only am I assisting with a class for which the curriculum is being developed afresh, but this class has a diverse group of freshman who are from less-resourced schools and may have less formal math and science background than some of their peers here, so beyond ensuring that I be an effective pedagog for freshmen, I now have to make sure that I can connect with these students by making myself feel inclusive rather than forbidding.

Most broadly, I now have to think more seriously about what I want to do after I graduate, as that point comes nearer. The big question is whether I want to stay in academia or not, given both the locations where I may find interesting opportunities and the nature of such opportunities. For a while, I thought that I would more likely want to leave academia given the tough odds of finding a tenured faculty position in a place that I would like to be, so I at least thought of doing an internship this coming summer outside of academia. While I still haven't ruled out the latter idea, I have come to realize that I enjoy academic research enough to consider continuing it for at least a few years after graduation, and I've also realized that it isn't necessarily a good choice to try to divine my career many years in the future based on my assessment of my current research progress, as that future becomes less certain the farther away it is. Given that, I also feel like a summer internship could disrupt the pace of my current research, so I would want to engage in it if I could be reasonably sure that it would actually help with my current research. However, if I forswear a summer internship to focus on my current research, then I have to really make sure that I fully investigate my options following graduation; for example, I have a few ideas on research topics to pursue following graduation, but I have no idea how feasible they are because they're in an adjacent field with which I have essentially no experience, so I need to get to know people in that field and make those connections to facilitate my next move. I'm going to the 2018 APS March Meeting next week, so with the uncertainty about my research projects & directions in the short- & long-terms along with the need to more seriously network with researchers in the field, this upcoming conference does feel like it has higher stakes for me than the one I went to last year, when I wasn't as worried about such things.

Such seems to be the course of research in a PhD. I'm glad that I've been able to take up these responsibilities and become a more well-rounded researcher & educator, and the uncertainty of research is gratifying to the extent that I get to investigate different ideas with the chance to fail and improve further in the hopes that I will ultimately hit upon something successful. However, the flip side of that uncertainty is stress when I realize that I have to deliver in some way, whether that means making a good impression & networking effectively at a conference or seriously considering upcoming career moves (where I again would have to make a good impression upon whoever may be evaluating me for a job). Ultimately, my hope is that I can continue to work hard & stay focused on what I need to do without letting that stress and uncertainty cloud my decision-making in the hope that my hard work will pay off, in the same way that in my second year, when I was stressed about my slow research progress relative to some of my peers, I simply pressed on and was eventually rewarded (through the fruit of my labor) with a publication at the beginning of my third year; even if that payoff doesn't come in the way that I expect, my hope is also that by that point, I will have cast a wide enough net that other options will be available to me too.

2018-01-15

Book Review: "I Contain Multitudes" by Ed Yong

I've recently read the book I Contain Multitudes by Ed Yong. It is a very broad and reasonably (for a general-audience text) deep exposition of the history and recent work in microbiology and biochemistry, covering the multitude of ways that microbes originated, shaped, and continue to affect life on Earth. In particular, it covers the impact of microbes on diverse ecosystems from shallow coral reefs to island jungles, and frames analysis of human digestive and immune systems in terms of island ecosystems as well after accounting for the associated microbiomes. Its broad goal is to show just how essential microbial life is to other life (often with reference to how model animals can be bred to be sterile but consequently have health problems), to the extent that organisms cannot really be characterized to have the functions that give them their identity without their microbiomes.

This book is moderately long, but it is quite engaging and reads quickly. One of the things that I really liked about this book was that the author was careful to be nuanced about developments in the field, without dampening his obvious enthusiasm for the subject as a whole. Whether it was through descriptions of the scientific controversies over "hologenomes", accounts of the problems with probiotic dietary supplements in general consumer markets, or the subtle ways that different forms of symbiosis (mutualism, commensalism, and parasitism) exist on a sliding scale, blend into each other depending on context, and are almost always built on foundations of managed/tamed conflict & cheating (even in the case of mutualism, which is too often cast with Pollyanna-ish connotations), he didn't try to cover up such issues, yet that didn't detract from the overall narrative. One thing that did seem weird was that the author at various points cautioned against using militaristic imagery for describing the immune system given the complexities of the immune system microbiome, yet there are a few places where he falls into that trap anyway; it isn't clear whether this is by accident, or if this is an acknowledgment of how entrenched such imagery is in the popular imagination that there aren't any suitable alternatives for writing to a general audience. Another was that the author, at a few points, repeated a few sentences or a short passage at the beginning of a chapter nearly verbatim near its end, though I will say that because he didn't overdo this, it added to the narrative by underscoring key ideas rather than seeming like bad writing. Overall, I thoroughly enjoyed this book and would recommend it to anyone who is interested in science, nature, or human health.

2017-04-03

My Time at the 2017 APS March Meeting

This is just a quick update from my graduate studies. In the middle of March, I was able to attend the 2017 APS March Meeting in New Orleans, Louisiana; this is the first conference that I have attended in any capacity. I had a ton of fun being able to travel there and meet with old friends, collaborators whom I had not yet met in person, and other people that I didn't know but who have been working on similar things to me; it was great being able to discuss interesting potential project ideas with them. Going to many talks was also cool, giving me a good sense of the state of my field and the sort of work that other people are doing, though in many respects, I honestly feel like I learned more just from talking with people at length in more informal settings. Finally, the highlight for me was getting to present my own work and seeing the interest that many people took in it: I was presenting a semiclassical electromagnetics approach to van der Waals interactions between molecules and larger bodies in a session dominated by density functional and atomistic long-range many-body approaches to van der Waals interactions solely in [large] molecular systems, so I was truly gratified to see that members of the audience saw value and significance in what I've been doing, especially given how different my talk was from those that came before and after it in that session. Overall, I had an amazing time, and I hope to be able to attend other conferences, both similar to this as well as more specific to my research, during my remaining time in graduate school.

2015-06-04

Ramblings on Depth and Breadth in Introductory Science Teaching

About a week ago, I was having dinner with a friend, and the topic of teaching in various science disciplines came up; he got his degree in biology, while I got mine in physics. One of the things that we both noticed in our undergraduate careers was that introductory physics classes tend to go fairly deep right away, focusing only on a few broad topics, whereas introductory biology classes go much more for breadth, with the depth coming in specific topics in later classes. It took us a little time to think of why this might be. I think we came up with a reasonable explanation, so follow the jump to see what that explanation might be (along with extensions of it).

A few warnings are in order. One is that although I've gone through a full undergraduate course sequence in physics, I have only taken one introductory biology class in my undergraduate studies, so I'm essentially comparing an insider view of one subject to an outsider view of another; worse, my insider view of physics was built over 4 years so it is fairly fresh in my memory, whereas my outsider view of biology came in a single semester 4 years ago, so my memory of it is rather fading (though it is augmented by the problem sets and exams that I saved on my computer). Therefore, some things I say about biology might as well come from my posterior. Given all this, if you see that I say something horribly wrong about biology (or physics, for that matter), tell me in the comments! The other is that this post may seem rambling and incoherent at times; that's because this is more of a brainstorm than anything else.

2011-02-05

Science Can Get Kind of Political Too

This semester I'm taking a class called "Technology in American History". Currently we are discussing the meaning of the word "technology" and how it can never be separated from the culture in which it exists.
One specific idea that we discussed was how technology in and of itself (and not just the creators and their motives) can be political. The best example of this is in Long Island in New York City, NY; there, the road overpasses are much lower than what is normally found elsewhere in the country. The reason for this wasn't based on cost, engineering design, or aesthetics; it was purely a political move. Apparently, the chief designer/engineer overseeing the design of the bridge was prejudiced against blacks and other minorities, and the new roads going under existing roads (necessitating the construction of overpasses in the old roads over the new roads) led to better, more wealthy parts of Long Island. He wanted to keep minorities out of those better parts of town, so he made the overpasses low enough that cars, mostly owned in Long Island by generally wealthier white people at that time, but not buses, mostly used in Long Island by generally poorer minorities at that time, could get through. I never knew that technology itself could overtly embody an agenda, but this example has really opened my eyes.
But one thing we agreed on in class is that in general, the sciences are a little more removed from the culture surrounding them, although there are pretty visible exceptions to this as well. I'm here to confirm this with one example from another class that I'm taking. I'm not talking about controversies like stem cell research, evolution, or anything like that.
Currently, I'm also taking Physics II Electricity & Magnetism. The class's lecture as well as my recitation leader are both theoretical physicists. They have insisted on using the CGS (centimeter-gram-second) system of units as opposed to the more familiar and common SI (Système International i.e. metric system) units. Why? Apparently CGS units are the system of choice for theoretical physicists. Yet as a student, not only do I have to learn new material, which is all good and fine, but I also have to learn it alongside a totally new system of units, which in electricity and magnetism is often not at all analogous to SI units. For example, in SI units the unit of current (the Ampere) is a base unit and is not derived from any other units. However, in CGS units the units of charge and current are both derived from units of mass, length, and time, which complicates things a lot both in terms of formulas and calculations. Given that almost all the students in this class are most familiar with using SI units in science calculations and have learned electricity & magnetism formulas and quantities in SI units, what's the point of needlessly introducing a totally different system along with more challenging material? I really enjoy my physics class lecturer and I think he's a great guy, but I think this shows that he has an agenda of some sort. It's sort of like how my chemistry professor last term started teaching us crystal field/ligand field theory and organometallic chemistry because it's his area of expertise (and he won a Nobel Prize for his work in organometallic chemistry); he was even pretty upfront about that being the reason why he was teaching us stuff that really didn't belong in a freshman introductory chemistry course.
The conclusion is that I just needed to vent about how confusing the CGS system can get at times. Sorry about that.